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ptre vector  (TaKaRa)


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    Structured Review

    TaKaRa ptre vector
    Ptre Vector, supplied by TaKaRa, used in various techniques. Bioz Stars score: 95/100, based on 576 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ptre+tight/pTRE-TIGHT+VECTOR/pmc12906178-156-13-15
    Average 95 stars, based on 576 article reviews
    ptre vector - by Bioz Stars, 2026-10
    95/100 stars

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    Related Articles

    Clone Assay:

    Article Title: Methods and compositions for increasing protein expression and/or treating a haploinsufficiency disorder
    Article Snippet: .. All tRNA gene sequences were individually cloned into pTRE-Tight (Clontech) using XhoI and PciI sites such that only the ampicillin resistance gene and Col E1 origin were left from pTRE-Tight. ..

    Article Title: NELF and PAF1C complexes are core transcriptional machineries controlling colon cancer stemness
    Article Snippet: .. TetOff cell clones of the representative human colon cancer cells DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC: RRID:CVCL_1384) were generated using pTetOff (631017; TAKARA) and pTRE-Tight (631059; TAKARA)-based plasmid vectors as previously described [ ]. ..

    Article Title: Methods and compositions for increasing protein expression and/or treating a haploinsufficiency disorder
    Article Snippet: A nucleotide sequence encoding an ATA tRNA (tRNAATA) is depicted in SEQ ID NO: 1, a nucleotide sequence encoding an GTA tRNA (tRNAGTA) is depicted in SEQ ID NO: 2, and a nucleotide sequence encoding an AGA tRNA (tRNAAGA) is depicted in SEQ ID NO: 3, The SCN1A open reading frame was amplified by RT-PCR from human brain RNA (Clontech) using primers that contain a KpnI site in the forward primer and a NotI site in the reverse primer. .. SCN1A ORF was then cloned between the promoter and SV40 poly (A) site of pTRE-Tight (Clontech) using KpnI and NotI sites. tRNAATA, tRNAGTA, and tRNAAGA gene sequences (including the tRNA coding sequence along with 200 base pairs (bp) of flanking genomic DNA sequence) were ordered as gBlocks (IDT) with an XhoI site in the 5′ end and a PciI site in the 3′ end. ..

    Article Title: NELF and PAF1C complexes are core transcriptional machineries controlling colon cancer stemness.
    Article Snippet: .. TetOff Oncogene cell clones of the representative human colon cancer cells DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC: RRID:CVCL_1384) were generated using pTetOff (631017; TAKARA) and pTRE-Tight (631059; TAKARA)-based plasmid vectors as previously described [26]. ..

    Plasmid Preparation:

    Article Title: Nutrient availability-driven changes in extracellular matrix biochemical and mechanical properties regulate pancreatic cancer cell biology
    Article Snippet: .. Human ITGA2 ( hITGA2 ) cDNA containing plasmid was obtained from Sino Biological (HG13024-M) and subcloned into a modified version of pTRE-Tight (Takara, 631059) with addition of a C-terminal FLAG tag using Gibson assembly. .. KPC2-EYFP Itga2 -KO cells were transduced as described above and subjected to 500 μg/ml hygromycin B (Invivogen, ant-hg-1) antibiotic selection two days later.

    Article Title: NELF and PAF1C complexes are core transcriptional machineries controlling colon cancer stemness
    Article Snippet: .. TetOff cell clones of the representative human colon cancer cells DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC: RRID:CVCL_1384) were generated using pTetOff (631017; TAKARA) and pTRE-Tight (631059; TAKARA)-based plasmid vectors as previously described [ ]. ..

    Article Title: NELF and PAF1C complexes are core transcriptional machineries controlling colon cancer stemness.
    Article Snippet: .. TetOff Oncogene cell clones of the representative human colon cancer cells DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC: RRID:CVCL_1384) were generated using pTetOff (631017; TAKARA) and pTRE-Tight (631059; TAKARA)-based plasmid vectors as previously described [26]. ..

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II-DSIF-PAF1C complex.
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [27, 40]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [27, 40]. ..

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II–DSIF–PAF1C complex
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [ , ]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [ , ]. ..

    Modification:

    Article Title: Nutrient availability-driven changes in extracellular matrix biochemical and mechanical properties regulate pancreatic cancer cell biology
    Article Snippet: .. Human ITGA2 ( hITGA2 ) cDNA containing plasmid was obtained from Sino Biological (HG13024-M) and subcloned into a modified version of pTRE-Tight (Takara, 631059) with addition of a C-terminal FLAG tag using Gibson assembly. .. KPC2-EYFP Itga2 -KO cells were transduced as described above and subjected to 500 μg/ml hygromycin B (Invivogen, ant-hg-1) antibiotic selection two days later.

    FLAG-tag:

    Article Title: Nutrient availability-driven changes in extracellular matrix biochemical and mechanical properties regulate pancreatic cancer cell biology
    Article Snippet: .. Human ITGA2 ( hITGA2 ) cDNA containing plasmid was obtained from Sino Biological (HG13024-M) and subcloned into a modified version of pTRE-Tight (Takara, 631059) with addition of a C-terminal FLAG tag using Gibson assembly. .. KPC2-EYFP Itga2 -KO cells were transduced as described above and subjected to 500 μg/ml hygromycin B (Invivogen, ant-hg-1) antibiotic selection two days later.

    Generated:

    Article Title: NELF and PAF1C complexes are core transcriptional machineries controlling colon cancer stemness
    Article Snippet: .. TetOff cell clones of the representative human colon cancer cells DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC: RRID:CVCL_1384) were generated using pTetOff (631017; TAKARA) and pTRE-Tight (631059; TAKARA)-based plasmid vectors as previously described [ ]. ..

    Article Title: NELF and PAF1C complexes are core transcriptional machineries controlling colon cancer stemness.
    Article Snippet: .. TetOff Oncogene cell clones of the representative human colon cancer cells DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC: RRID:CVCL_1384) were generated using pTetOff (631017; TAKARA) and pTRE-Tight (631059; TAKARA)-based plasmid vectors as previously described [26]. ..

    Amplification:

    Article Title: ERBB4 colocalizes with phosphorylated tau aggregates in multiple tauopathies.
    Article Snippet: .. To generate pTRE-Tight-hTau-FLAG and pEGFP-N1-hERBB4 plasmids, human tau (4R isoform) and ERBB4 (isoform b) cDNAs were amplified by PCR and subcloned into the pTRE-Tight (Clontech, 631059) and pEGFP-N1 (Clontech, 6085-1) vectors, respectively. ..

    Polymerase Chain Reaction:

    Article Title: ERBB4 colocalizes with phosphorylated tau aggregates in multiple tauopathies.
    Article Snippet: .. To generate pTRE-Tight-hTau-FLAG and pEGFP-N1-hERBB4 plasmids, human tau (4R isoform) and ERBB4 (isoform b) cDNAs were amplified by PCR and subcloned into the pTRE-Tight (Clontech, 631059) and pEGFP-N1 (Clontech, 6085-1) vectors, respectively. ..

    Sequencing:

    Article Title: Methods and compositions for increasing protein expression and/or treating a haploinsufficiency disorder
    Article Snippet: A nucleotide sequence encoding an ATA tRNA (tRNAATA) is depicted in SEQ ID NO: 1, a nucleotide sequence encoding an GTA tRNA (tRNAGTA) is depicted in SEQ ID NO: 2, and a nucleotide sequence encoding an AGA tRNA (tRNAAGA) is depicted in SEQ ID NO: 3, The SCN1A open reading frame was amplified by RT-PCR from human brain RNA (Clontech) using primers that contain a KpnI site in the forward primer and a NotI site in the reverse primer. .. SCN1A ORF was then cloned between the promoter and SV40 poly (A) site of pTRE-Tight (Clontech) using KpnI and NotI sites. tRNAATA, tRNAGTA, and tRNAAGA gene sequences (including the tRNA coding sequence along with 200 base pairs (bp) of flanking genomic DNA sequence) were ordered as gBlocks (IDT) with an XhoI site in the 5′ end and a PciI site in the 3′ end. ..

    Gene Expression:

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II-DSIF-PAF1C complex.
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [27, 40]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [27, 40]. ..

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II–DSIF–PAF1C complex
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [ , ]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [ , ]. ..

    Concentration Assay:

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II-DSIF-PAF1C complex.
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [27, 40]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [27, 40]. ..

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II–DSIF–PAF1C complex
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [ , ]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [ , ]. ..

    Expressing:

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II-DSIF-PAF1C complex.
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [27, 40]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [27, 40]. ..

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II–DSIF–PAF1C complex
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [ , ]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [ , ]. ..

    Transfection:

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II-DSIF-PAF1C complex.
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [27, 40]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [27, 40]. ..

    Article Title: CDX1 and CDX2 suppress colon cancer stemness by inhibiting β-catenin-facilitated formation of Pol II–DSIF–PAF1C complex
    Article Snippet: TetOff cell clones were generated by transfecting the human colon cancer cell lines, DLD1 (CCL-221; ATCC) and LS174T (CL188; ATCC) with pTet-Off- (631017; TAKARA)-based plasmid vectors in accordance with the methodology in a previous study [ , ]. .. Gene expression was regulated by adding doxycycline (24390-14-5; TGI), a tetracycline analog, to the culture medium at a final concentration of 0.5 μg/mL. pTRE-Tight (631059; TAKARA)-based plasmid vectors capable of inducible expression of Cdx1, Cdx2, and their HD mutants were transfected into DLD1-TetOff and LS174T-TetOff cells in accordance with a previously published methodology [ , ]. ..



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    Image Search Results


    A: Experimental design for cortex-restricted chemogenetic activation. An expression plasmid for hM3Dq-mCherry was in utero electroporated unilaterally to the dorsolateral cortex of ICR wild-type embryos at E12.5-15.5. After the resulting male mice grew up till postnatal 8 week, CNO or vehicle PBS was intraperitoneally administered to the mice, and the pupil sizes of both eyes were measured in a dark room. B: Boxplot showing the pupil diameters from eyes at 20-50 mins after administration of PBS (pale yellow) and CNO (blue) in ICR mice whose cortices were in utero electroporated for hM3Dq at E12.5, E13.5, E14.5 and E15.5. The black line shows the difference of pupil diameters in individual eyes between PBS and CNO treatments. X marks the mean. One-tailed paired t-tests were performed between PBS and CNO treatments. C, D: Distribution of hM3Dq-positive areas and FOS-positive neurons in cortical layers of somatosensory areas on the in utero electroporated (EP) and unelectroporated (non-EP) sides. The same mice in B were analyzed at postmortem.

    Journal: bioRxiv

    Article Title: Phenotype-driven screening reveals a causal role for the cortex in pupil control

    doi: 10.64898/2026.03.17.712501

    Figure Lengend Snippet: A: Experimental design for cortex-restricted chemogenetic activation. An expression plasmid for hM3Dq-mCherry was in utero electroporated unilaterally to the dorsolateral cortex of ICR wild-type embryos at E12.5-15.5. After the resulting male mice grew up till postnatal 8 week, CNO or vehicle PBS was intraperitoneally administered to the mice, and the pupil sizes of both eyes were measured in a dark room. B: Boxplot showing the pupil diameters from eyes at 20-50 mins after administration of PBS (pale yellow) and CNO (blue) in ICR mice whose cortices were in utero electroporated for hM3Dq at E12.5, E13.5, E14.5 and E15.5. The black line shows the difference of pupil diameters in individual eyes between PBS and CNO treatments. X marks the mean. One-tailed paired t-tests were performed between PBS and CNO treatments. C, D: Distribution of hM3Dq-positive areas and FOS-positive neurons in cortical layers of somatosensory areas on the in utero electroporated (EP) and unelectroporated (non-EP) sides. The same mice in B were analyzed at postmortem.

    Article Snippet: pAAV-PTRE-tight -hM3Dq-mCherry was obtained from Dr William Wisden (Addgene plasmid # 66795) and the coding sequences for hM3Dq fused with mCherry were subcloned into a CAGGS expression plasmid .

    Techniques: Activation Assay, Expressing, Plasmid Preparation, In Utero, One-tailed Test